Transcript: lnc-ANXA8-3:1

Basic information

LNCipedia transcript ID: lnc-ANXA8-3:1 
LNCipedia gene ID: lnc-ANXA8-3
Location (hg19): chr10:48357926-48358600
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 227 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000431774.1; RP11-463P17.3-001; OTTHUMT00000047887.1; NONHSAT013217
Alternative gene names: ENSG00000228865.1; RP11-463P17.3; OTTHUMG00000018146.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -351.8256 non-coding 
CPAT coding probability 11.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANXA8-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL591684.1-1:1
4.0 lnc-AL591684.1-1:1
4.1 lnc-AL591684.1-1:1
5.0 lnc-AL591684.1-1:1
5.1 lnc-LRRC18-43:1
5.2 lnc-ANXA8-3:1