Transcript: lnc-API5-4:2

Basic information

LNCipedia transcript ID: lnc-API5-4:2 
LNCipedia gene ID: lnc-API5-4
Location (hg19): chr11:41872021-41881407
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 801 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00019280; NONHSAT018897
Alternative gene names: XLOC_009113; linc-API5-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -23.0959 non-coding 
CPAT coding probability 0.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-API5-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-API5-3:2
3.1 lnc-API5-4:2
4.0 lnc-API5-4:2
4.1 lnc-API5-4:2
5.0 lnc-API5-4:2
5.1 lnc-CAPRIN1-55:2
5.2 lnc-API5-4:2