Transcript: lnc-APOBEC4-4:1

Basic information

LNCipedia transcript ID: lnc-APOBEC4-4:1 
LNCipedia gene ID: lnc-APOBEC4-4
Location (hg19): chr1:183678440-183679375
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 936 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT008369
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -31.1013 non-coding 
CPAT coding probability 10.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-APOBEC4-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-APOBEC4-4:1
4.0 lnc-APOBEC4-4:1
4.1 lnc-APOBEC4-4:1
5.0 lnc-APOBEC4-4:1
5.1 lnc-MYOG-163:1
5.2 lnc-APOBEC4-4:1