Transcript: lnc-APOL1-1:5

Basic information

LNCipedia transcript ID: lnc-APOL1-1:5 
LNCipedia gene ID: lnc-APOL1-1
Location (hg19): chr22:36784438-36810928
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5111 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000223695.1|MICT00000233002.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 19.2618 non-coding 
CPAT coding probability 0.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-APOL1-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-APOL1-1:5
5.0 lnc-APOL1-1:5
5.1 lnc-MCM5-36:3
5.2 lnc-APOL1-1:5