Transcript: lnc-ARAP2-80:1

Basic information

LNCipedia transcript ID: lnc-ARAP2-80:1 
LNCipedia gene ID: lnc-ARAP2-80
RefSeq ID: NR_134682
Location (hg19): chr4:32007475-32024044
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 403 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_134682.1
Alternative gene names: LOC105377651


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -57.8505 non-coding 
CPAT coding probability 6.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARAP2-80:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-GABRA4-80:1
5.1 lnc-GABRA4-80:1
5.2 lnc-ARAP2-80:1