Transcript: lnc-ARF1-1:2

Basic information

LNCipedia transcript ID: lnc-ARF1-1:2 
LNCipedia gene ID: lnc-ARF1-1
Location (hg19): chr1:228291180-228292320
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1141 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA86:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 56.6466 non-coding 
CPAT coding probability 1.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ARF1-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ARF1-1:2
4.1 lnc-ARF1-1:2
5.0 lnc-ARF1-1:2
5.1 lnc-ZNF678-13:2
5.2 lnc-ARF1-1:2