Transcript: lnc-ARHGAP10-5:1

Basic information

LNCipedia transcript ID: lnc-ARHGAP10-5:1 
LNCipedia gene ID: lnc-ARHGAP10-5
Location (hg19): chr4:149363864-149364769
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 789 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000070525.1|FTMT21500011127.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -259.3495 non-coding 
CPAT coding probability 0.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARHGAP10-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ARHGAP10-5:1
5.0 lnc-ARHGAP10-5:1
5.1 lnc-C4orf51-28:1
5.2 lnc-ARHGAP10-5:1