Transcript: lnc-ARHGAP15-2:4

Basic information

LNCipedia transcript ID: lnc-ARHGAP15-2:4 
LNCipedia gene ID: lnc-ARHGAP15-2
RefSeq ID: NR_110237
Location (hg19): chr2:144694634-144721723
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1052 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110237.1
Alternative gene names: LOC101928386


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -101.0292 non-coding 
CPAT coding probability 0.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARHGAP15-2:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-KCNJ3-77:2
5.1 lnc-KCNJ3-77:2
5.2 lnc-ARHGAP15-2:4