Transcript: lnc-ARHGAP19-3:1

Basic information

LNCipedia transcript ID: lnc-ARHGAP19-3:1 
LNCipedia gene ID: lnc-ARHGAP19-3
RefSeq ID: NR_037909
Location (hg19): chr10:98912799-99052430
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1916 bp
Exons: 15
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_037909; NR_037909.1
Alternative gene names: ARHGAP19-SLIT1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4140.4054 coding 
CPAT coding probability 100.00% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ARHGAP19-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FRAT2-3:1
4.0 lnc-ARHGAP19-3:1
4.1 lnc-ARHGAP19-3:1
5.0 lnc-ARHGAP19-3:1
5.1 lnc-CPN1-92:1
5.2 lnc-ARHGAP19-3:1