Transcript: lnc-ARHGAP20-11:2

Basic information

LNCipedia transcript ID: lnc-ARHGAP20-11:2 
LNCipedia gene ID: lnc-ARHGAP20-11
Location (hg19): chr11:109939240-109940261
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1022 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000006914.1|FTMT24200006189.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -27.1743 non-coding 
CPAT coding probability 1.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARHGAP20-11:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RDX-11:1
5.0 lnc-RDX-11:1
5.1 lnc-ARHGAP20-13:1
5.2 lnc-ARHGAP20-11:2