Transcript: lnc-ARHGAP28-14:1

Basic information

LNCipedia transcript ID: lnc-ARHGAP28-14:1 
LNCipedia gene ID: lnc-ARHGAP28-14
Location (hg19): chr18:5870590-5877725
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 384 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_1517_chr18:5870589-5877725_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -224.4898 non-coding 
CPAT coding probability 0.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARHGAP28-14:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AP001496.1-14:1
4.0 lnc-AP001496.1-14:1
4.1 lnc-AP001496.1-14:1
5.0 lnc-AP001496.1-14:1
5.1 lnc-RIOK3-251:1
5.2 lnc-ARHGAP28-14:1