Transcript: lnc-ARHGEF26-11:1

Basic information

LNCipedia transcript ID: lnc-ARHGEF26-11:1 
LNCipedia gene ID: lnc-ARHGEF26-11
Location (hg19): chr3:153528586-153529499
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 914 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expReg_chr3_10419_+
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -64.8788 non-coding 
CPAT coding probability 1.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARHGEF26-11:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C3orf79-11:1
4.0 lnc-C3orf79-11:1
4.1 lnc-C3orf79-11:1
5.0 lnc-C3orf79-11:1
5.1 lnc-LEKR1-32:1
5.2 lnc-ARHGEF26-11:1