Transcript: lnc-ARHGEF4-3:2

Basic information

LNCipedia transcript ID: lnc-ARHGEF4-3:2 
LNCipedia gene ID: lnc-ARHGEF4-3
Location (hg19): chr2:131555231-131564385
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1595 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000044607.1|MICT00000199311.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 42.5236 non-coding 
CPAT coding probability 21.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ARHGEF4-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ARHGEF4-3:2
5.0 lnc-ARHGEF4-3:2
5.1 lnc-GPR17-48:2
5.2 lnc-ARHGEF4-3:2