Transcript: lnc-ARHGEF7-7:1

Basic information

LNCipedia transcript ID: lnc-ARHGEF7-7:1 
LNCipedia gene ID: lnc-ARHGEF7-7
RefSeq ID: NR_126378
Location (hg19): chr13:111618374-111642949
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 716 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_126378; NR_126378.1
Alternative gene names: ; LINC00431


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -28.4536 non-coding 
CPAT coding probability 9.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARHGEF7-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARHGEF7-2:3
4.0 LINC00431:1
4.1 LINC00431:1
5.0 LINC00431:1
5.1 lnc-COL4A2-18:1
5.2 lnc-ARHGEF7-7:1