Transcript: lnc-ARID2-12:1

Basic information

LNCipedia transcript ID: lnc-ARID2-12:1 
LNCipedia gene ID: lnc-ARID2-12
Ensembl Gene ID: ENSG00000275481
Ensembl Transcript ID: ENST00000621248
Location (hg19): chr12:46782639-46785909
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3271 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT027878; ENST00000621248.1
Alternative gene names: ENSG00000275481.1; RP11-474P2.6; AC025031.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -113.151 non-coding 
CPAT coding probability 0.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARID2-12:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARID2-12:1
4.0 lnc-ARID2-12:1
4.1 lnc-ARID2-12:1
5.0 lnc-ARID2-12:1
5.1 lnc-PCED1B-15:1
5.2 lnc-ARID2-12:1