Transcript: lnc-ARID4B-1:2

Basic information

LNCipedia transcript ID: lnc-ARID4B-1:2 
LNCipedia gene ID: lnc-ARID4B-1
Ensembl Gene ID: ENSG00000285177
Ensembl Transcript ID: ENST00000646955
Location (hg19): chr1:235529668-235530681
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 428 bp
Exons: 2
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000646955.1
Alternative gene names: ENSG00000285177.1; AL357556.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 9.6952 non-coding 
CPAT coding probability 1.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARID4B-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-MTRNR2L11-27:1
5.1 lnc-MTRNR2L11-27:1
5.2 lnc-ARID4B-1:2