Transcript: lnc-ARL15-4:1

Basic information

LNCipedia transcript ID: lnc-ARL15-4:1 
LNCipedia gene ID: lnc-ARL15-4
Ensembl Gene ID: ENSG00000272416
Ensembl Transcript ID: ENST00000606482
Location (hg19): chr5:53176123-53176881
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 759 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000606482.1
Alternative gene names: ENSG00000272416.1; CTD-2081C10.7; AC025175.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -100.6284 non-coding 
CPAT coding probability 2.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARL15-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARL15-4:1
4.0 lnc-ARL15-4:1
4.1 lnc-ARL15-4:1
5.0 lnc-ARL15-4:1
5.1 lnc-ACTBL2-45:1
5.2 lnc-ARL15-4:1