Transcript: lnc-ARL16-3:1

Basic information

LNCipedia transcript ID: lnc-ARL16-3:1 
LNCipedia gene ID: lnc-ARL16-3
Location (hg19): chr17:79674572-79679336
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4765 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT056554
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3.7922 non-coding 
CPAT coding probability 38.11% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ARL16-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARL16-3:1
4.0 lnc-ARL16-3:1
4.1 lnc-ARL16-3:1
5.0 lnc-ARL16-3:1
5.1 lnc-NPLOC4-7:1
5.2 lnc-ARL16-3:1