Transcript: lnc-ARMCX1-1:3

Basic information

LNCipedia transcript ID: lnc-ARMCX1-1:3 
LNCipedia gene ID: lnc-ARMCX1-1
Location (hg19): chrX:100753656-100760357
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1132 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT137932
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -28.9023 non-coding 
CPAT coding probability 6.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARMCX1-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP1-164F3.9.1-1:13
4.0 lnc-ARMCX1-1:3
4.1 lnc-ARMCX1-1:3
5.0 lnc-ARMCX1-1:3
5.1 lnc-TEX13C-262:1
5.2 lnc-ARMCX1-1:3