Transcript: lnc-ARRB2-2:1

Basic information

LNCipedia transcript ID: lnc-ARRB2-2:1 
LNCipedia gene ID: lnc-ARRB2-2
Location (hg19): chr17:4578674-4600129
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 387 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000441700.1; AC091153.4-001; OTTHUMT00000256471.1; NONHSAT145099
Alternative gene names: ENSG00000235085.1; AC091153.4; OTTHUMG00000132939.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.7771 non-coding 
CPAT coding probability 2.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARRB2-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARRB2-2:1
4.0 lnc-ARRB2-2:1
4.1 lnc-ARRB2-2:1
5.0 lnc-ARRB2-2:1
5.1 lnc-ELP5-69:2
5.2 lnc-ARRB2-2:1