Transcript: lnc-ARRDC5-3:1

Basic information

LNCipedia transcript ID: lnc-ARRDC5-3:1 
LNCipedia gene ID: lnc-ARRDC5-3
Location (hg19): chr19:5215378-5220027
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1270 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT060682
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -36.8931 non-coding 
CPAT coding probability 86.89% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ARRDC5-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARRDC5-3:1
4.0 lnc-ARRDC5-3:1
4.1 lnc-ARRDC5-3:1
5.0 lnc-ARRDC5-3:1
5.1 lnc-ZNF77-142:1
5.2 lnc-ARRDC5-3:1