Transcript: lnc-ARSA-1:1

Basic information

LNCipedia transcript ID: lnc-ARSA-1:1 
LNCipedia gene ID: lnc-ARSA-1
Location (hg19): chr22:51216088-51222058
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 612 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT087542
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -8.3961 non-coding 
CPAT coding probability 40.80% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ARSA-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARSA-1:1
4.0 lnc-ARSA-1:1
4.1 lnc-ARSA-1:1
5.0 lnc-ARSA-1:1
5.1 lnc-DENND6B-14:1
5.2 lnc-ARSA-1:1