Transcript: lnc-ARSD-6:1

Basic information

LNCipedia transcript ID: lnc-ARSD-6:1 
LNCipedia gene ID: lnc-ARSD-6
Location (hg19): chrX:2747200-2752230
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 282 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_3882_chrX:2747199-2752216_liver
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -3.3288 non-coding 
CPAT coding probability 6.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARSD-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARSD-6:1
4.0 lnc-ARSD-6:1
4.1 lnc-ARSD-6:1
5.0 lnc-ARSD-6:1
5.1 lnc-PCSK1N-259:1
5.2 lnc-ARSD-6:1