Transcript: lnc-ARSF-1:2

Basic information

LNCipedia transcript ID: lnc-ARSF-1:2 
LNCipedia gene ID: lnc-ARSF-1
Location (hg19): chrX:3114327-3118067
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 528 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00017130; NONHSAT136111
Alternative gene names: XLOC_007920; linc-STS-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.0799 non-coding 
CPAT coding probability 5.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARSF-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CXorf28-1:1
3.1 lnc-CXorf28-1:1
4.0 lnc-CXorf28-1:1
4.1 lnc-CXorf28-1:1
5.0 lnc-CXorf28-1:1
5.1 lnc-GK-179:2
5.2 lnc-ARSF-1:2