Transcript: lnc-ASAH2-3:1

Basic information

LNCipedia transcript ID: lnc-ASAH2-3:1 
LNCipedia gene ID: lnc-ASAH2-3
Location (hg19): chr10:51847832-51848336
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 505 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expReg_chr10_3296_-
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.4186 non-coding 
CPAT coding probability 0.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ASAH2-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ASAH2-3:1
4.0 lnc-ASAH2-3:1
4.1 lnc-ASAH2-3:1
5.0 lnc-ASAH2-3:1
5.1 lnc-LRRC18-33:1
5.2 lnc-ASAH2-3:1