Transcript: lnc-ASAP2-5:2

Basic information

LNCipedia transcript ID: lnc-ASAP2-5:2 
LNCipedia gene ID: lnc-ASAP2-5
Location (hg19): chr2:9144206-9146103
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1898 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000041742.1|ENCT00000219855.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -15.7856 non-coding 
CPAT coding probability 5.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ASAP2-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ASAP2-5:2
5.0 lnc-ASAP2-5:2
5.1 lnc-SNX17-222:2
5.2 lnc-ASAP2-5:2