Transcript: lnc-ASB3-12:1

Basic information

LNCipedia transcript ID: lnc-ASB3-12:1 
LNCipedia gene ID: lnc-ASB3-12
Location (hg19): chr2:52918447-52925210
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 563 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00004253; NONHSAT070676
Alternative gene names: XLOC_002096; linc-NRXN1-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -416.1276 non-coding 
CPAT coding probability 1.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ASB3-12:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ASB3-2:1
3.1 lnc-ASB3-2:1
4.0 lnc-ASB3-2:1
4.1 lnc-ASB3-2:1
5.0 lnc-ASB3-2:1
5.1 lnc-PPP4R3B-53:1
5.2 lnc-ASB3-12:1