Transcript: lnc-ASB3-1:10

Basic information

LNCipedia transcript ID: lnc-ASB3-1:10 
LNCipedia gene ID: lnc-ASB3-1
Location (hg19): chr2:53160482-53161638
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1157 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000048410.1|FTMT20600002930.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -96.2386 non-coding 
CPAT coding probability 1.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ASB3-1:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ASB3-1:10
5.0 lnc-ASB3-1:10
5.1 lnc-PPP4R3B-54:9
5.2 lnc-ASB3-1:10