Transcript: lnc-ASB9-1:1

Basic information

LNCipedia transcript ID: lnc-ASB9-1:1 
LNCipedia gene ID: lnc-ASB9-1
Location (hg19): chrX:15250368-15254002
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1046 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00017489; NONHSAT136333
Alternative gene names: XLOC_008118; linc-FANCB


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.5032 non-coding 
CPAT coding probability 1.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ASB9-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ASB9-1:1
3.1 lnc-ASB9-1:1
4.0 lnc-ASB9-1:1
4.1 lnc-ASB9-1:1
5.0 lnc-ASB9-1:1
5.1 lnc-PCSK1N-191:2
5.2 lnc-ASB9-1:1