Transcript: lnc-ASH1L-2:2

Basic information

LNCipedia transcript ID: lnc-ASH1L-2:2 
LNCipedia gene ID: lnc-ASH1L-2
Ensembl Gene ID: ENSG00000232519
Ensembl Transcript ID: ENST00000456382
Location (hg19): chr1:155579567-155580171
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 220 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000456382.2
Alternative gene names: ENSG00000232519.2; RP11-29H23.4; AL353807.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -17.5602 non-coding 
CPAT coding probability 7.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ASH1L-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ASH1L-2:2
4.0 lnc-ASH1L-2:2
4.1 lnc-ASH1L-2:2
5.0 lnc-ASH1L-2:2
5.1 lnc-RIT1-9:2
5.2 lnc-ASH1L-2:2