Transcript: lnc-ASIC2-2:3

Basic information

LNCipedia transcript ID: lnc-ASIC2-2:3 
LNCipedia gene ID: lnc-ASIC2-2
Location (hg19): chr17:32546137-32579145
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 558 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000261156.2|HBMT00000625039.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -213.5416 non-coding 
CPAT coding probability 0.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ASIC2-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ACCN1-2:4
5.0 lnc-ACCN1-2:4
5.1 lnc-SLC6A4-148:3
5.2 lnc-ASIC2-2:3