Transcript: lnc-ASMT-6:3

Basic information

LNCipedia transcript ID: lnc-ASMT-6:3 
LNCipedia gene ID: lnc-ASMT-6
Location (hg19): chrX:1826398-1834838
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 301 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_3879_chrX:1826397-1834838_whiteBloodCell
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4.8125 non-coding 
CPAT coding probability 0.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ASMT-6:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ASMT-6:3
4.0 lnc-ASMT-6:3
4.1 lnc-ASMT-6:3
5.0 lnc-ASMT-6:3
5.1 lnc-GK-191:3
5.2 lnc-ASMT-6:3