Transcript: lnc-ASPH-1:4

Basic information

LNCipedia transcript ID: lnc-ASPH-1:4 
LNCipedia gene ID: lnc-ASPH-1
Location (hg19): chr8:62671303-62673909
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1962 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000251127.2|ENCT00000435595.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -16.1677 non-coding 
CPAT coding probability 1.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ASPH-1:4 no no no no

Available literature

  1. Yang (2015), Expression profile of long non-coding RNAs is altered in endometrial cancer., Int J Clin Exp Med


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ASPH-1:4
5.0 lnc-ASPH-1:4
5.1 lnc-IMPAD1-78:4
5.2 lnc-ASPH-1:4