Transcript: lnc-ASPH-5:7

Basic information

LNCipedia transcript ID: lnc-ASPH-5:7 
LNCipedia gene ID: lnc-ASPH-5
Location (hg19): chr8:61879542-61880333
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 792 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000254802.1|HBMT00001409664.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -128.0402 non-coding 
CPAT coding probability 3.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ASPH-5:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ASPH-5:7
5.0 lnc-ASPH-5:7
5.1 lnc-IMPAD1-66:4
5.2 lnc-ASPH-5:7