Transcript: lnc-ATAD1-2:2

Basic information

LNCipedia transcript ID: lnc-ATAD1-2:2 
LNCipedia gene ID: lnc-ATAD1-2
Location (hg19): chr10:89369920-89419756
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 740 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000196566.2|ENST00000354527.2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 2.2852 non-coding 
CPAT coding probability 21.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATAD1-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ATAD1-2:2
5.0 lnc-ATAD1-2:2
5.1 lnc-HTR7-37:2
5.2 lnc-ATAD1-2:2