Transcript: lnc-ATE1-7:1

Basic information

LNCipedia transcript ID: lnc-ATE1-7:1 
LNCipedia gene ID: lnc-ATE1-7
Location (hg19): chr10:123274741-123278343
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 386 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT016702
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -80.0975 non-coding 
CPAT coding probability 6.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATE1-7:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ATE1-6:3
4.0 lnc-ATE1-7:1
4.1 lnc-ATE1-7:1
5.0 lnc-ATE1-7:1
5.1 lnc-NSMCE4A-17:1
5.2 lnc-ATE1-7:1