Transcript: lnc-ATG12-1:1

Basic information

LNCipedia transcript ID: lnc-ATG12-1:1 
LNCipedia gene ID: lnc-ATG12-1
Location (hg19): chr5:115148879-115150178
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 273 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT103325
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -899.0179 non-coding 
CPAT coding probability 2.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATG12-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ATG12-1:1
4.0 lnc-ATG12-1:1
4.1 lnc-ATG12-1:1
5.0 lnc-ATG12-1:1
5.1 lnc-LOX-100:1
5.2 lnc-ATG12-1:1