Transcript: lnc-ATG2B-10:2

Basic information

LNCipedia transcript ID: lnc-ATG2B-10:2 
LNCipedia gene ID: lnc-ATG2B-10
Location (hg19): chr14:96541326-96543874
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1216 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_1051_chr14:96541325-96543874_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.2794 non-coding 
CPAT coding probability 5.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATG2B-10:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-404P21.6.1-10:1
4.0 lnc-RP11-404P21.6.1-10:1
4.1 lnc-RP11-404P21.6.1-10:1
5.0 lnc-RP11-404P21.6.1-10:1
5.1 lnc-TCL1A-10:1
5.2 lnc-ATG2B-10:2