Transcript: lnc-ATG5-31:2

Basic information

LNCipedia transcript ID: lnc-ATG5-31:2 
LNCipedia gene ID: lnc-ATG5-31
Ensembl Gene ID: ENSG00000284999
Ensembl Transcript ID: ENST00000642235
Location (hg19): chr6:106312109-106340916
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 654 bp
Exons: 3
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000642235.1
Alternative gene names: ENSG00000284999.1; AL591518.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -78.2329 non-coding 
CPAT coding probability 1.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATG5-31:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-SNX3-31:2
5.1 lnc-SNX3-31:2
5.2 lnc-ATG5-31:2