Transcript: lnc-ATL1-8:3

Basic information

LNCipedia transcript ID: lnc-ATL1-8:3 
LNCipedia gene ID: lnc-ATL1-8
Location (hg19): chr14:51135274-51138548
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3275 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000018895.1|FTMT25600002114.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -27.0477 non-coding 
CPAT coding probability 0.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATL1-8:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ATL1-8:3
5.0 lnc-ATL1-8:3
5.1 lnc-AP5M1-94:3
5.2 lnc-ATL1-8:3