Transcript: lnc-ATP10D-23:1

Basic information

LNCipedia transcript ID: lnc-ATP10D-23:1 
LNCipedia gene ID: lnc-ATP10D-23
Location (hg19): chr4:47916244-47961158
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 596 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT096274
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -98.6591 non-coding 
CPAT coding probability 8.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATP10D-23:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NIPAL1-1:3
4.0 lnc-NIPAL1-1:3
4.1 lnc-NIPAL1-1:3
5.0 lnc-NIPAL1-1:3
5.1 lnc-ATP10D-6:3
5.2 lnc-ATP10D-23:1