Transcript: lnc-ATP11B-10:9

Basic information

LNCipedia transcript ID: lnc-ATP11B-10:9 
LNCipedia gene ID: lnc-ATP11B-10
Location (hg19): chr3:182971141-183014099
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 550 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT093638
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score -120.4558 non-coding 
CPAT coding probability 3.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ATP11B-10:9 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ATP11B-10:2
4.0 lnc-B3GNT5-10:2
4.1 lnc-B3GNT5-10:2
5.0 lnc-B3GNT5-10:2
5.1 lnc-KLHL24-7:2
5.2 lnc-ATP11B-10:9