Transcript: lnc-ATP2B3-1:7

Basic information

LNCipedia transcript ID: lnc-ATP2B3-1:7 
LNCipedia gene ID: lnc-ATP2B3-1
Location (hg19): chrX:152864809-152874816
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3410 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000260081.1|MICT00000382198.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -10.2735 non-coding 
CPAT coding probability 93.77% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ATP2B3-1:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ATP2B3-1:7
5.0 lnc-ATP2B3-1:7
5.1 lnc-MAGEA11-50:6
5.2 lnc-ATP2B3-1:7