Transcript: lnc-ATP2B3-1:8

Basic information

LNCipedia transcript ID: lnc-ATP2B3-1:8 
LNCipedia gene ID: lnc-ATP2B3-1
Location (hg19): chrX:152864809-152872662
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1135 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000260081.1|ENCT00000473585.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -23.3158 non-coding 
CPAT coding probability 94.53% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ATP2B3-1:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ATP2B3-1:8
5.0 lnc-ATP2B3-1:8
5.1 lnc-MAGEA11-50:4
5.2 lnc-ATP2B3-1:8