Transcript: lnc-ATP5F1A-2:1

Basic information

LNCipedia transcript ID: lnc-ATP5F1A-2:1 
LNCipedia gene ID: lnc-ATP5F1A-2
Location (hg19): chr18:43770666-43772482
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 460 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_1575_chr18:43770665-43772482_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -18.2446 non-coding 
CPAT coding probability 2.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATP5F1A-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ATP5A1-2:1
4.0 lnc-ATP5A1-2:1
4.1 lnc-ATP5A1-2:1
5.0 lnc-ATP5A1-2:1
5.1 lnc-SMAD2-25:1
5.2 lnc-ATP5F1A-2:1