Transcript: lnc-ATP6AP2-9:3

Basic information

LNCipedia transcript ID: lnc-ATP6AP2-9:3 
LNCipedia gene ID: lnc-ATP6AP2-9
Location (hg19): chrX:40007163-40011419
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 707 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT136685
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -197.2413 non-coding 
CPAT coding probability 0.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATP6AP2-9:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ATP6AP2-9:3
4.0 lnc-ATP6AP2-9:3
4.1 lnc-ATP6AP2-9:3
5.0 lnc-ATP6AP2-9:3
5.1 lnc-CHST7-77:3
5.2 lnc-ATP6AP2-9:3