Transcript: lnc-ATP6V1B2-2:7

Basic information

LNCipedia transcript ID: lnc-ATP6V1B2-2:7 
LNCipedia gene ID: lnc-ATP6V1B2-2
Location (hg19): chr8:19936750-19980277
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5499 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000253775.1|MICT00000339960.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 3.0315 non-coding 
CPAT coding probability 1.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATP6V1B2-2:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ATP6V1B2-2:7
5.0 lnc-ATP6V1B2-2:7
5.1 lnc-SH2D4A-14:5
5.2 lnc-ATP6V1B2-2:7