Transcript: lnc-ATP6V1F-1:4

Basic information

LNCipedia transcript ID: lnc-ATP6V1F-1:4 
LNCipedia gene ID: lnc-ATP6V1F-1
Location (hg19): chr7:128510821-128512098
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1278 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000609480.1
Alternative gene names: ENSG00000272899.1; RP11-309L24.9


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -303.213 non-coding 
CPAT coding probability 8.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATP6V1F-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ATP6V1F-2:1
4.0 lnc-ATP6V1F-1:4
4.1 lnc-ATP6V1F-1:4
5.0 lnc-ATP6V1F-1:4
5.1 lnc-TSPAN33-7:4
5.2 lnc-ATP6V1F-1:4