Transcript: lnc-ATP6V1G1-4:1

Basic information

LNCipedia transcript ID: lnc-ATP6V1G1-4:1 
LNCipedia gene ID: lnc-ATP6V1G1-4
Location (hg19): chr9:117314470-117315660
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 872 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000106793.1|ENCT00000449759.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -57.6496 non-coding 
CPAT coding probability 2.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATP6V1G1-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ATP6V1G1-4:1
5.0 lnc-ATP6V1G1-4:1
5.1 lnc-PRPF4-31:1
5.2 lnc-ATP6V1G1-4:1