Transcript: lnc-ATP6V1H-6:1

Basic information

LNCipedia transcript ID: lnc-ATP6V1H-6:1 
LNCipedia gene ID: lnc-ATP6V1H-6
Location (hg19): chr8:54474264-54476685
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 749 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_3595_chr8:54474263-54476685_ovary
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.4918 non-coding 
CPAT coding probability 0.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATP6V1H-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ATP6V1H-6:1
4.0 lnc-ATP6V1H-6:1
4.1 lnc-ATP6V1H-6:1
5.0 lnc-ATP6V1H-6:1
5.1 lnc-IMPAD1-52:1
5.2 lnc-ATP6V1H-6:1